You have mentioned Atlas Number 6 turnouts.
Were these turnouts manufacturied in the United States of America and or the Peoples Republic of China?
Atlas marks the country of origin on the bottome side of cross ties on all of it’s track products.
Could be that the frogs are not insulated correctly.
Switch points could be loose.
If you suspect that a specific turnout and or turnouts are the problem, contact Atlas.
I do not know what the policy is nowdays, that they manufacturing nothing in house at the former plant in Hillside, New Jersey.
It could very well take several months to recieve replacements.
Do you have a low voltage test lamp, a 12 volt D.C.?
If not one can be purchase at a automotive parts store.
Test to see if you are getting power on all sides of the turnout. Atlas turnouts are powered on all sides, not selective, in other words, you have to block and put power leeds in on which side of track you want power to.
Assuming your layout is conventional D.C.?
Start from power pack and trace down with test lamp. Make sure power pack is on.
Then there to the next track connection and or to power terminal strip.
Do not know how your layout is wired.
It’s a bit slower doing a ciruit by circuit test, with a test lamp, but is simple to use, as opposed with a multi-meter and cost associated with and knowledge on how to use to conduct various electrical test.
Trying to save you a few bucks.
It does not sound if your problem is with your locomotives.
Sometimes solder joints on electrical connections can fool you, think that they are OK. All that it takes is a slight and a do mean a slight, smaller than hair line crack to disturb a electrical circuit.
Are all of your rail connectors tight?
How long is the cable lines (electrical wiring)?
Gage of cable?
Might try wiring in a few more terminals if you have long runs of cable.